STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG89417.1Acyl-CoA dehydrogenase. (408 aa)    
Predicted Functional Partners:
SDG89632.1
Acyl-CoA dehydrogenase.
     0.954
SDG89539.1
Acetyl-CoA acetyltransferase.
 
 
  0.894
SDG89501.1
Uncharacterized OB-fold protein, contains Zn-ribbon domain.
 
  
  0.853
SDG89326.1
Streptomycin 6-kinase.
 
  0.833
SDG89588.1
acyl-CoA dehydrogenase.
 
    
0.821
SDE55986.1
Acyl-CoA dehydrogenase.
     0.809
SDG36463.1
acyl-CoA dehydrogenase.
     0.803
SDG03695.1
Acyl-CoA dehydrogenase, N-terminal domain.
 
     0.789
SDG36631.1
Acyl-CoA dehydrogenase, N-terminal domain.
 
     0.788
SDG89373.1
Hypothetical protein.
  
    0.784
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.