STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG90436.1Amino acid ABC transporter ATP-binding protein, PAAT family. (279 aa)    
Predicted Functional Partners:
SDG90478.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.999
SDG90521.1
ABC-type amino acid transport substrate-binding protein.
 
 0.992
SDH66382.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.989
SDF30036.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.988
SDF30083.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.988
SDF48753.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.968
SDF29974.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.939
SDF48707.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.932
SDH66451.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.857
SDF46575.1
Hypothetical protein.
  
 0.850
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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