STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG90478.1Amino acid ABC transporter membrane protein, PAAT family. (221 aa)    
Predicted Functional Partners:
SDG90436.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.999
SDF48707.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  0.996
SDG90521.1
ABC-type amino acid transport substrate-binding protein.
 
  0.995
SDF29933.1
Glutamate transport system ATP-binding protein.
 0.984
SDF48795.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.984
SDH66413.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.984
SDF29974.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
  0.859
SDH66451.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
  0.776
SDH52982.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
   
   0.718
SDF69211.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
  0.676
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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