STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG96275.1precorrin-6Y C5,15-methyltransferase (decarboxylating). (423 aa)    
Predicted Functional Partners:
SDG96309.1
Precorrin-4/cobalt-precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 0.999
SDG96348.1
precorrin-6A/cobalt-precorrin-6A reductase.
 
 
 0.999
SDG96382.1
Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 
 0.999
SDG96419.1
precorrin-8X methylmutase.
 
 
 0.999
SDG96497.1
Cobaltochelatase CobN subunit.
 
  
 0.986
SDF24203.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
 
 
 0.978
SDF24934.1
precorrin-6A synthase (deacetylating).
 
 
 0.969
SDF24242.1
Histidinol-phosphate aminotransferase/cobalt-precorrin 5A hydrolase/cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase.
  
  
 0.957
SDG96462.1
precorrin-3B synthase.
 
  
 0.948
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
  
 0.928
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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