STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH07349.1FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. (434 aa)    
Predicted Functional Partners:
SDH07389.1
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family.
 
    
0.793
SDH64246.1
Hypothetical protein.
  
     0.754
SDH22557.1
Alkanesulfonate monooxygenase.
  
    0.659
SDH22851.1
FMN reductase.
 
  0.585
SDG62048.1
Acyl-CoA dehydrogenase.
  
    0.513
SDH07257.1
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family.
 
    
0.510
SDH33011.1
FMN reductase.
 
  0.488
SDH07301.1
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family.
 
    
0.476
SDH42576.1
Acyl-CoA dehydrogenase, N-terminal domain.
  
    0.440
SDH60509.1
Amino acid adenylation domain-containing protein.
   
 0.409
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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