Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE92789.1 | SDG69650.1 | SAMN05216377_102488 | SAMN05216377_11476 | Dihydrolipoamide dehydrogenase. | Glutamate synthase (NADPH/NADH) large chain. | 0.861 |
SDE92789.1 | SDH10716.1 | SAMN05216377_102488 | SAMN05216377_1192 | Dihydrolipoamide dehydrogenase. | Amidinotransferase. | 0.433 |
SDE92789.1 | egtB | SAMN05216377_102488 | SAMN05216377_103123 | Dihydrolipoamide dehydrogenase. | iron(II)-dependent oxidoreductase; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma-L- glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine; Belongs to the EgtB family. | 0.770 |
SDE99394.1 | SDG69650.1 | SAMN05216377_1034 | SAMN05216377_11476 | 5'-3' exonuclease. | Glutamate synthase (NADPH/NADH) large chain. | 0.549 |
SDE99394.1 | SDH10716.1 | SAMN05216377_1034 | SAMN05216377_1192 | 5'-3' exonuclease. | Amidinotransferase. | 0.411 |
SDG17814.1 | SDG69650.1 | SAMN05216377_109229 | SAMN05216377_11476 | Agmatinase; Belongs to the arginase family. | Glutamate synthase (NADPH/NADH) large chain. | 0.935 |
SDG17814.1 | SDG99770.1 | SAMN05216377_109229 | SAMN05216377_117147 | Agmatinase; Belongs to the arginase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.643 |
SDG17814.1 | SDH10716.1 | SAMN05216377_109229 | SAMN05216377_1192 | Agmatinase; Belongs to the arginase family. | Amidinotransferase. | 0.506 |
SDG17814.1 | arcA | SAMN05216377_109229 | SAMN05216377_103277 | Agmatinase; Belongs to the arginase family. | Arginine deiminase. | 0.713 |
SDG17814.1 | argG | SAMN05216377_109229 | SAMN05216377_117149 | Agmatinase; Belongs to the arginase family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.626 |
SDG17814.1 | glgC | SAMN05216377_109229 | SAMN05216377_108103 | Agmatinase; Belongs to the arginase family. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.663 |
SDG48984.1 | SDG69650.1 | SAMN05216377_11299 | SAMN05216377_11476 | L-threonine aldolase. | Glutamate synthase (NADPH/NADH) large chain. | 0.550 |
SDG48984.1 | SDH10716.1 | SAMN05216377_11299 | SAMN05216377_1192 | L-threonine aldolase. | Amidinotransferase. | 0.447 |
SDG69650.1 | SDE92789.1 | SAMN05216377_11476 | SAMN05216377_102488 | Glutamate synthase (NADPH/NADH) large chain. | Dihydrolipoamide dehydrogenase. | 0.861 |
SDG69650.1 | SDE99394.1 | SAMN05216377_11476 | SAMN05216377_1034 | Glutamate synthase (NADPH/NADH) large chain. | 5'-3' exonuclease. | 0.549 |
SDG69650.1 | SDG17814.1 | SAMN05216377_11476 | SAMN05216377_109229 | Glutamate synthase (NADPH/NADH) large chain. | Agmatinase; Belongs to the arginase family. | 0.935 |
SDG69650.1 | SDG48984.1 | SAMN05216377_11476 | SAMN05216377_11299 | Glutamate synthase (NADPH/NADH) large chain. | L-threonine aldolase. | 0.550 |
SDG69650.1 | SDG99770.1 | SAMN05216377_11476 | SAMN05216377_117147 | Glutamate synthase (NADPH/NADH) large chain. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.673 |
SDG69650.1 | SDH10716.1 | SAMN05216377_11476 | SAMN05216377_1192 | Glutamate synthase (NADPH/NADH) large chain. | Amidinotransferase. | 0.848 |
SDG69650.1 | argG | SAMN05216377_11476 | SAMN05216377_117149 | Glutamate synthase (NADPH/NADH) large chain. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.952 |
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