STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH20819.1Molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (601 aa)    
Predicted Functional Partners:
SDG72659.1
Formate dehydrogenase iron-sulfur subunit.
 
 0.976
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.848
SDG69650.1
Glutamate synthase (NADPH/NADH) large chain.
  
 0.794
SDH20786.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
    
  0.778
SDE66327.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit.
  
 
 0.756
SDE83683.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
 0.716
SDH15175.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.705
SDG00724.1
Adenylyltransferase and sulfurtransferase.
 
  
 0.672
SDG69133.1
ferredoxin--NADP+ reductase.
  
 
 0.672
SDH21936.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
  
 0.669
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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