STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH43233.1Luciferase-like monooxygenase. (353 aa)    
Predicted Functional Partners:
SDH43197.1
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family.
 
    
0.841
SDH40483.1
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family.
 
     0.774
SDH64246.1
Hypothetical protein.
 
     0.774
SDH41134.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.773
SDH43107.1
Luciferase family oxidoreductase, group 1.
       0.773
SDH43155.1
Hypothetical protein.
       0.773
SDH43280.1
Sarcosine oxidase.
       0.773
SDH33011.1
FMN reductase.
 
  0.520
SDH42900.1
Hypothetical protein.
  
     0.511
SDH22851.1
FMN reductase.
 
  0.502
Your Current Organism:
Pseudonocardia oroxyli
NCBI taxonomy Id: 366584
Other names: CGMCC 4.3143, DSM 44984, JCM 13909, P. oroxyli, Pseudonocardia oroxyli Gu et al. 2006, Pseudonocardia sp. D10, strain D10
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