Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE62657.1 | SDH58076.1 | SAMN05216377_101367 | SAMN05216377_1275 | Winged helix DNA-binding domain-containing protein. | Winged helix DNA-binding domain-containing protein. | 0.444 |
SDE85662.1 | SDH58076.1 | SAMN05216377_102294 | SAMN05216377_1275 | Regulatory protein, luxR family. | Winged helix DNA-binding domain-containing protein. | 0.482 |
SDF15105.1 | SDH58076.1 | SAMN05216377_103378 | SAMN05216377_1275 | Winged helix DNA-binding domain-containing protein. | Winged helix DNA-binding domain-containing protein. | 0.463 |
SDF87522.1 | SDG39307.1 | SAMN05216377_107176 | SAMN05216377_111151 | Transcriptional regulator, TetR family. | Transcriptional regulator, TetR family. | 0.676 |
SDF87522.1 | SDG52819.1 | SAMN05216377_107176 | SAMN05216377_112206 | Transcriptional regulator, TetR family. | Transcriptional regulatory protein, C terminal. | 0.475 |
SDF87522.1 | SDH58076.1 | SAMN05216377_107176 | SAMN05216377_1275 | Transcriptional regulator, TetR family. | Winged helix DNA-binding domain-containing protein. | 0.527 |
SDG39307.1 | SDF87522.1 | SAMN05216377_111151 | SAMN05216377_107176 | Transcriptional regulator, TetR family. | Transcriptional regulator, TetR family. | 0.676 |
SDG39307.1 | SDH58076.1 | SAMN05216377_111151 | SAMN05216377_1275 | Transcriptional regulator, TetR family. | Winged helix DNA-binding domain-containing protein. | 0.425 |
SDG52819.1 | SDF87522.1 | SAMN05216377_112206 | SAMN05216377_107176 | Transcriptional regulatory protein, C terminal. | Transcriptional regulator, TetR family. | 0.475 |
SDG52819.1 | SDH22266.1 | SAMN05216377_112206 | SAMN05216377_12097 | Transcriptional regulatory protein, C terminal. | Hypothetical protein. | 0.447 |
SDG52819.1 | SDH58076.1 | SAMN05216377_112206 | SAMN05216377_1275 | Transcriptional regulatory protein, C terminal. | Winged helix DNA-binding domain-containing protein. | 0.430 |
SDG60583.1 | SDH58076.1 | SAMN05216377_11397 | SAMN05216377_1275 | Dihydrofolate reductase. | Winged helix DNA-binding domain-containing protein. | 0.494 |
SDH22266.1 | SDG52819.1 | SAMN05216377_12097 | SAMN05216377_112206 | Hypothetical protein. | Transcriptional regulatory protein, C terminal. | 0.447 |
SDH22266.1 | SDH58076.1 | SAMN05216377_12097 | SAMN05216377_1275 | Hypothetical protein. | Winged helix DNA-binding domain-containing protein. | 0.530 |
SDH33536.1 | SDH58076.1 | SAMN05216377_12154 | SAMN05216377_1275 | FAD binding domain-containing protein. | Winged helix DNA-binding domain-containing protein. | 0.447 |
SDH58076.1 | SDE62657.1 | SAMN05216377_1275 | SAMN05216377_101367 | Winged helix DNA-binding domain-containing protein. | Winged helix DNA-binding domain-containing protein. | 0.444 |
SDH58076.1 | SDE85662.1 | SAMN05216377_1275 | SAMN05216377_102294 | Winged helix DNA-binding domain-containing protein. | Regulatory protein, luxR family. | 0.482 |
SDH58076.1 | SDF15105.1 | SAMN05216377_1275 | SAMN05216377_103378 | Winged helix DNA-binding domain-containing protein. | Winged helix DNA-binding domain-containing protein. | 0.463 |
SDH58076.1 | SDF87522.1 | SAMN05216377_1275 | SAMN05216377_107176 | Winged helix DNA-binding domain-containing protein. | Transcriptional regulator, TetR family. | 0.527 |
SDH58076.1 | SDG39307.1 | SAMN05216377_1275 | SAMN05216377_111151 | Winged helix DNA-binding domain-containing protein. | Transcriptional regulator, TetR family. | 0.425 |
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