Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE55086.1 | SDH67314.1 | SAMN05216377_101146 | SAMN05216377_13311 | Protein of unknown function. | Transcriptional regulator, TetR family. | 0.587 |
SDE84396.1 | SDH67314.1 | SAMN05216377_102254 | SAMN05216377_13311 | Anti-sigma-K factor rskA. | Transcriptional regulator, TetR family. | 0.453 |
SDG72268.1 | SDH67314.1 | SAMN05216377_114153 | SAMN05216377_13311 | PRC-barrel domain-containing protein. | Transcriptional regulator, TetR family. | 0.416 |
SDH14029.1 | SDH67314.1 | SAMN05216377_11995 | SAMN05216377_13311 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.412 |
SDH67248.1 | SDH67287.1 | SAMN05216377_1339 | SAMN05216377_13310 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Acyl-CoA dehydrogenase. | 0.663 |
SDH67248.1 | SDH67314.1 | SAMN05216377_1339 | SAMN05216377_13311 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Transcriptional regulator, TetR family. | 0.478 |
SDH67287.1 | SDH67248.1 | SAMN05216377_13310 | SAMN05216377_1339 | Acyl-CoA dehydrogenase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.663 |
SDH67287.1 | SDH67314.1 | SAMN05216377_13310 | SAMN05216377_13311 | Acyl-CoA dehydrogenase. | Transcriptional regulator, TetR family. | 0.608 |
SDH67314.1 | SDE55086.1 | SAMN05216377_13311 | SAMN05216377_101146 | Transcriptional regulator, TetR family. | Protein of unknown function. | 0.587 |
SDH67314.1 | SDE84396.1 | SAMN05216377_13311 | SAMN05216377_102254 | Transcriptional regulator, TetR family. | Anti-sigma-K factor rskA. | 0.453 |
SDH67314.1 | SDG72268.1 | SAMN05216377_13311 | SAMN05216377_114153 | Transcriptional regulator, TetR family. | PRC-barrel domain-containing protein. | 0.416 |
SDH67314.1 | SDH14029.1 | SAMN05216377_13311 | SAMN05216377_11995 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.412 |
SDH67314.1 | SDH67248.1 | SAMN05216377_13311 | SAMN05216377_1339 | Transcriptional regulator, TetR family. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.478 |
SDH67314.1 | SDH67287.1 | SAMN05216377_13311 | SAMN05216377_13310 | Transcriptional regulator, TetR family. | Acyl-CoA dehydrogenase. | 0.608 |