STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_0406PFAM: ParB domain protein nuclease; KEGG: rpb:RPB_0786 hypothetical protein. (325 aa)    
Predicted Functional Partners:
Caul_2235
PFAM: protein of unknown function DUF736; KEGG: bbt:BBta_p0280 hypothetical protein.
 
     0.720
Caul_3810
PFAM: protein of unknown function DUF736; KEGG: bbt:BBta_7309 hypothetical protein.
 
     0.713
Caul_3822
PFAM: protein of unknown function DUF736; KEGG: xau:Xaut_2872 protein of unknown function DUF736.
  
     0.690
Caul_2277
KEGG: pde:Pden_1474 hypothetical protein.
  
     0.689
Caul_3821
KEGG: xau:Xaut_0756 putative conjugal transfer protein precursor.
 
   
 0.662
Caul_3809
KEGG: xau:Xaut_2861 hypothetical protein.
 
     0.649
Caul_3811
KEGG: rle:pRL70009 hypothetical protein.
 
     0.640
Caul_0478
KEGG: xau:Xaut_0772 hypothetical protein.
 
     0.634
Caul_3815
KEGG: mes:Meso_3838 hypothetical protein.
  
     0.619
Caul_1980
KEGG: bbt:BBta_7428 hypothetical protein.
  
     0.613
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.