Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caul_0484PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hne:HNE_1470 putative TonB dependent receptor. (723 aa)    
Predicted Functional Partners:
Caul_0486
KEGG: pla:Plav_0538 hypothetical protein.
 
     0.761
Caul_0487
KEGG: hne:HNE_1472 hypothetical protein.
 
     0.761
Caul_3783
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_2291 TonB-dependent receptor.
  
     0.755
Caul_1970
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_4318 TonB-dependent receptor.
  
     0.742
Caul_0591
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcb:XC_2899 TonB-dependent receptor.
  
     0.731
Caul_3289
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_1691 TonB-dependent receptor.
  
     0.716
Caul_0485
TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; KEGG: pla:Plav_0536 citrate/H+ symporter, CitMHS family.
       0.686
Caul_0865
OmpA/MotB domain protein; PFAM: surface antigen msp4 family protein; OmpA/MotB domain protein; KEGG: ccr:CC_0747 OmpA family protein.
 
  
 0.638
Caul_1378
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_1093 TonB-dependent receptor, putative.
  
  
 0.638
Caul_4662
PFAM: OmpA/MotB domain protein; KEGG: ccr:CC_3494 OmpA family protein.
 
  
 0.633
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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