Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Caul_0502PFAM: amidohydrolase 2; KEGG: bbt:BBta_3003 hypothetical protein. (325 aa)    
Predicted Functional Partners:
Caul_0501
IgiC, putative; KEGG: fre:Franean1_3716 IgiC, putative.
 
     0.655
Caul_0500
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gvi:glr2859 probable oxidoreductase.
       0.465
Caul_0586
PFAM: NIPSNAP family containing protein; KEGG: dac:Daci_0041 NIPSNAP family containing protein.
 
     0.459
Caul_0496
PFAM: MmgE/PrpD family protein; KEGG: xau:Xaut_1347 MmgE/PrpD family protein.
  
     0.445
Caul_3846
4-hydroxybenzoate 3-monooxygenase; KEGG: ccr:CC_2404 p-hydroxybenzoate hydroxylase; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding.
 
   
 0.430
Caul_1138
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bra:BRADO1868 transcriptional regulatory protein, GntR family.
 
   
 0.410
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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