Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caul_0571 | Caul_0589 | PFAM: beta-lactamase; KEGG: hne:HNE_1031 putative esterase. | PFAM: beta-lactamase; KEGG: aba:Acid345_0637 beta-lactamase. | 0.530 |
Caul_0589 | Caul_0571 | PFAM: beta-lactamase; KEGG: aba:Acid345_0637 beta-lactamase. | PFAM: beta-lactamase; KEGG: hne:HNE_1031 putative esterase. | 0.530 |
Caul_0589 | Caul_2779 | PFAM: beta-lactamase; KEGG: aba:Acid345_0637 beta-lactamase. | PFAM: beta-lactamase; KEGG: ccr:CC_1706 hypothetical protein. | 0.729 |
Caul_0589 | Caul_4667 | PFAM: beta-lactamase; KEGG: aba:Acid345_0637 beta-lactamase. | PFAM: beta-lactamase; KEGG: ccr:CC_0575 beta-lactamase, putative. | 0.483 |
Caul_2779 | Caul_0589 | PFAM: beta-lactamase; KEGG: ccr:CC_1706 hypothetical protein. | PFAM: beta-lactamase; KEGG: aba:Acid345_0637 beta-lactamase. | 0.729 |
Caul_4667 | Caul_0589 | PFAM: beta-lactamase; KEGG: ccr:CC_0575 beta-lactamase, putative. | PFAM: beta-lactamase; KEGG: aba:Acid345_0637 beta-lactamase. | 0.483 |