STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_0619KEGG: rle:RL4038 hypothetical protein. (579 aa)    
Predicted Functional Partners:
Caul_0612
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rle:RL4035 putative two component sensor histidine kinase chemotaxis protein CheA.
 
 
 0.869
Caul_0613
PFAM: CheW domain protein; KEGG: ret:RHE_CH03521 chemotaxis signal transduction protein.
 
  
 0.851
Caul_0616
PFAM: CheW domain protein; KEGG: rle:RL4030 putative chemotaxis protein.
 
  
 0.807
Caul_0615
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rle:RL4032 putative sensory transducer methyl-acccepting chemotaxis protein.
 
 
 0.803
Caul_0620
KEGG: ccr:CC_2852 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 
 0.803
Caul_0614
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ret:RHE_CH03520 putative methyl-accepting chemotaxis protein.
 
 
 0.776
Caul_0719
PFAM: response regulator receiver; KEGG: psp:PSPPH_1371 sensory box histidine kinase/response regulator.
 
 
 0.744
Caul_0279
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: ccr:CC_0433 chemotaxis protein CheA.
  
 
 0.740
Caul_3301
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rpc:RPC_4607 CheA signal transduction histidine kinases.
  
 
 0.740
Caul_0617
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
  
 0.731
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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