STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_0855PFAM: Protein of unknown function DUF1971; KEGG: swi:Swit_3175 truncated hemoglobins-like protein. (224 aa)    
Predicted Functional Partners:
hmp
Oxidoreductase FAD/NAD(P)-binding domain protein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
  
  
 0.973
Caul_0854
TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: swi:Swit_1789 transcriptional regulator, BadM/Rrf2 family.
  
  
 0.652
Caul_3857
Hemerythrin HHE cation binding domain protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
  
  
 0.557
Caul_3870
KEGG: hne:HNE_1566 hypothetical protein.
  
  
 0.557
Caul_2061
PFAM: DSBA oxidoreductase; KEGG: swi:Swit_3598 DsbA oxidoreductase.
  
  
 0.450
Caul_2709
PFAM: DSBA oxidoreductase; KEGG: ccr:CC_1843 hypothetical protein.
  
  
 0.450
Caul_2334
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: sal:Sala_2468 oxidoreductase FAD-binding region.
  
  
 0.439
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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