STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_0984PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: ccr:CC_0872 hypothetical protein. (253 aa)    
Predicted Functional Partners:
Caul_0983
PFAM: ribonuclease BN; KEGG: rsp:RSP_2660 ribonuclease BN family protein.
       0.548
Caul_3992
Flavodoxin/nitric oxide synthase; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: ccr:CC_3063 sulfite reductase (NADPH) flavoprotein alpha-component.
    
 
 0.481
Caul_0982
PFAM: GCN5-related N-acetyltransferase; KEGG: ccr:CC_0871 hypothetical protein.
       0.422
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.