Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caul_1024KEGG: ccr:CC_3039 hypothetical protein. (330 aa)    
Predicted Functional Partners:
Caul_1025
Response regulator receiver protein; PFAM: LytTr DNA-binding region; KEGG: ccr:CC_3036 hypothetical protein.
 
     0.749
Caul_2515
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ccr:CC_1672 transcriptional regulator, AraC family.
 
     0.568
Caul_1536
PFAM: polysaccharide deacetylase; KEGG: ccr:CC_2428 polysaccharide deacetylase.
  
     0.491
Caul_1114
KEGG: ccr:CC_2193 hypothetical protein.
  
     0.483
Caul_3258
KEGG: ccr:CC_2025 hypothetical protein.
  
     0.472
Caul_1022
KEGG: ccr:CC_3041 FliJ protein.
       0.465
Caul_1023
ATPase, FliI/YscN family; KEGG: ccr:CC_3040 flagellum-specific ATP synthase FliI; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase.
       0.465
Caul_1021
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: ccr:CC_3042 endo-1,4-beta-xylanase.
       0.454
Caul_3423
PFAM: Sel1 domain protein repeat-containing protein; KEGG: ccr:CC_2477 hypothetical protein.
  
     0.426
Caul_4690
PFAM: protein of unknown function DUF1353; KEGG: ccr:CC_0218 hypothetical protein.
  
     0.407
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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