STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1040KEGG: ccr:CC_0801 mannanase, putative; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (440 aa)    
Predicted Functional Partners:
Caul_4627
PFAM: PTS system fructose subfamily IIA component; KEGG: ccr:CC_0240 PTS system, IIA component.
     
  0.900
Caul_0150
PFAM: ROK family protein; KEGG: ccr:CC_2465 ROK family protein.
     
  0.800
Caul_0965
PFAM: ROK family protein; KEGG: swi:Swit_1151 ROK family protein.
     
  0.800
Caul_2130
PFAM: ROK family protein; KEGG: ccr:CC_2465 ROK family protein.
     
  0.800
Caul_4081
PFAM: glycosyl hydrolase 53 domain protein; KEGG: xcv:XCV1360 putative galactosidase precursor.
 
     0.655
Caul_1292
PFAM: glycoside hydrolase family 31; PA14 domain protein; KEGG: ccr:CC_0789 glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family.
 
     0.620
Caul_1843
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_2804 TonB-dependent receptor.
  
     0.612
Caul_1283
PFAM: glycoside hydrolase family 5; KEGG: bja:blr3367 probable cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.589
Caul_1291
PFAM: glycoside hydrolase family 35; Glycoside hydrolase family 42 domain protein; KEGG: ccr:CC_0788 hypothetical protein.
  
     0.577
Caul_2412
Alpha-galactosidase; PFAM: glycoside hydrolase clan GH-D; Glycosyl hydrolase family 98 putative carbohydrate binding module; KEGG: sus:Acid_2820 alpha-galactosidase.
 
     0.575
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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