STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1111TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_2194 TonB-dependent receptor. (754 aa)    
Predicted Functional Partners:
Caul_1114
KEGG: ccr:CC_2193 hypothetical protein.
     
 0.578
Caul_1988
PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: ccr:CC_2709 TonB-dependent receptor.
  
     0.574
Caul_2738
PFAM: periplasmic binding protein; KEGG: nar:Saro_1187 periplasmic binding protein.
 
  
 0.559
Caul_2243
PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: ccr:CC_2709 TonB-dependent receptor.
  
     0.546
Caul_1112
Hypothetical protein.
  
    0.540
Caul_1113
KEGG: dac:Daci_0140 hypothetical protein.
  
    0.540
Caul_2426
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_4738 TonB-dependent receptor.
  
  
 0.540
Caul_2740
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A0491 ABC transporter component.
 
  
 0.508
Caul_2101
TIGRFAM: TonB family protein; KEGG: rpb:RPB_2216 TonB-like protein.
 
 
 0.483
Caul_2739
PFAM: transport system permease protein; KEGG: rsh:Rsph17029_1067 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.475
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.