Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caul_1119 | Caul_1120 | PFAM: peptidase M61 domain protein; KEGG: zmo:ZMO1593 predicted protease. | PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC2193 TonB-dependent receptor. | 0.668 |
Caul_1119 | Caul_1121 | PFAM: peptidase M61 domain protein; KEGG: zmo:ZMO1593 predicted protease. | PFAM: peptidase S51 dipeptidase E; KEGG: nmu:Nmul_A1900 cyanophycinase and related exopeptidase-like; Belongs to the peptidase S51 family. | 0.410 |
Caul_1120 | Caul_1119 | PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC2193 TonB-dependent receptor. | PFAM: peptidase M61 domain protein; KEGG: zmo:ZMO1593 predicted protease. | 0.668 |
Caul_1120 | Caul_1121 | PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC2193 TonB-dependent receptor. | PFAM: peptidase S51 dipeptidase E; KEGG: nmu:Nmul_A1900 cyanophycinase and related exopeptidase-like; Belongs to the peptidase S51 family. | 0.799 |
Caul_1120 | Caul_1123 | PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC2193 TonB-dependent receptor. | PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc02504 putative transcription regulator protein. | 0.407 |
Caul_1121 | Caul_1119 | PFAM: peptidase S51 dipeptidase E; KEGG: nmu:Nmul_A1900 cyanophycinase and related exopeptidase-like; Belongs to the peptidase S51 family. | PFAM: peptidase M61 domain protein; KEGG: zmo:ZMO1593 predicted protease. | 0.410 |
Caul_1121 | Caul_1120 | PFAM: peptidase S51 dipeptidase E; KEGG: nmu:Nmul_A1900 cyanophycinase and related exopeptidase-like; Belongs to the peptidase S51 family. | PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC2193 TonB-dependent receptor. | 0.799 |
Caul_1121 | Caul_1122 | PFAM: peptidase S51 dipeptidase E; KEGG: nmu:Nmul_A1900 cyanophycinase and related exopeptidase-like; Belongs to the peptidase S51 family. | PFAM: peptidase T2 asparaginase 2; KEGG: mxa:MXAN_1160 asparaginase family protein. | 0.966 |
Caul_1121 | Caul_1123 | PFAM: peptidase S51 dipeptidase E; KEGG: nmu:Nmul_A1900 cyanophycinase and related exopeptidase-like; Belongs to the peptidase S51 family. | PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc02504 putative transcription regulator protein. | 0.556 |
Caul_1121 | Caul_4831 | PFAM: peptidase S51 dipeptidase E; KEGG: nmu:Nmul_A1900 cyanophycinase and related exopeptidase-like; Belongs to the peptidase S51 family. | PFAM: peptidase T2 asparaginase 2; KEGG: ccr:CC_0097 asparaginase family protein. | 0.704 |
Caul_1122 | Caul_1121 | PFAM: peptidase T2 asparaginase 2; KEGG: mxa:MXAN_1160 asparaginase family protein. | PFAM: peptidase S51 dipeptidase E; KEGG: nmu:Nmul_A1900 cyanophycinase and related exopeptidase-like; Belongs to the peptidase S51 family. | 0.966 |
Caul_1122 | Caul_1123 | PFAM: peptidase T2 asparaginase 2; KEGG: mxa:MXAN_1160 asparaginase family protein. | PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc02504 putative transcription regulator protein. | 0.668 |
Caul_1122 | Caul_4831 | PFAM: peptidase T2 asparaginase 2; KEGG: mxa:MXAN_1160 asparaginase family protein. | PFAM: peptidase T2 asparaginase 2; KEGG: ccr:CC_0097 asparaginase family protein. | 0.920 |
Caul_1123 | Caul_1120 | PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc02504 putative transcription regulator protein. | PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC2193 TonB-dependent receptor. | 0.407 |
Caul_1123 | Caul_1121 | PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc02504 putative transcription regulator protein. | PFAM: peptidase S51 dipeptidase E; KEGG: nmu:Nmul_A1900 cyanophycinase and related exopeptidase-like; Belongs to the peptidase S51 family. | 0.556 |
Caul_1123 | Caul_1122 | PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc02504 putative transcription regulator protein. | PFAM: peptidase T2 asparaginase 2; KEGG: mxa:MXAN_1160 asparaginase family protein. | 0.668 |
Caul_4831 | Caul_1121 | PFAM: peptidase T2 asparaginase 2; KEGG: ccr:CC_0097 asparaginase family protein. | PFAM: peptidase S51 dipeptidase E; KEGG: nmu:Nmul_A1900 cyanophycinase and related exopeptidase-like; Belongs to the peptidase S51 family. | 0.704 |
Caul_4831 | Caul_1122 | PFAM: peptidase T2 asparaginase 2; KEGG: ccr:CC_0097 asparaginase family protein. | PFAM: peptidase T2 asparaginase 2; KEGG: mxa:MXAN_1160 asparaginase family protein. | 0.920 |