STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1204KEGG: ccr:CC_1059 hypothetical protein. (237 aa)    
Predicted Functional Partners:
Caul_1203
PFAM: Chromosomal replication initiator DnaA domain; KEGG: ccr:CC_1058 hypothetical protein.
 
 
 
 0.885
Caul_3918
PFAM: protein of unknown function DUF264; KEGG: ccr:CC_2790 hypothetical protein.
 
     0.768
Caul_3910
TIGRFAM: phage major tail protein, TP901-1 family; KEGG: ccr:CC_2781 hypothetical protein.
  
     0.761
Caul_3483
PFAM: protein of unknown function DUF264; KEGG: sit:TM1040_1057 protein of unknown function DUF264.
 
     0.759
Caul_3903
KEGG: ccr:CC_2776 hypothetical protein.
  
     0.756
Caul_3916
TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: ccr:CC_2788 genetic exchange protein, putative.
  
    0.751
Caul_3913
TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: ccr:CC_2783 hypothetical protein.
  
  
 0.750
Caul_3914
TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: ccr:CC_2786 protease, putative.
  
     0.747
Caul_3904
PFAM: conserved hypothetical protein; KEGG: ccr:CC_2777 hypothetical protein.
  
     0.742
Caul_3902
TIGRFAM: phage cell wall peptidase, NlpC/P60 family; KEGG: ccr:CC_2775 hypothetical protein.
  
   
 0.727
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.