STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1426PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ccr:CC_0986 transcriptional regulator, GntR family. (253 aa)    
Predicted Functional Partners:
Caul_0498
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bbr:BB2825 putative GntR-family transcriptional regulator.
 
  
 0.722
Caul_1427
Mandelate racemase/muconate lactonizing protein; Catalyzes the dehydration of D-mannonate. Has no detectable activity with a panel of 70 other acid sugars (in vitro).
 
   
 0.605
Caul_3761
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ccr:CC_2661 transcriptional regulator, GntR family.
 
  
 0.604
Caul_1138
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bra:BRADO1868 transcriptional regulatory protein, GntR family.
 
  
 0.603
Caul_3956
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ccr:CC_3142 transcriptional regulator, GntR family.
 
  
 0.432
lldD
FMN-dependent alpha-hydroxy acid dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.
 
  
 0.422
Caul_0578
PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pde:Pden_3050 regulatory proteins, IclR.
 
  
 0.412
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.