STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1510PFAM: plasmid stabilization system; KEGG: ccr:CC_2984 hypothetical protein. (93 aa)    
Predicted Functional Partners:
Caul_1511
TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: pla:Plav_1046 putative transcriptional regulator, CopG/Arc/MetJ family.
 
 
 0.974
Caul_0986
TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: ccr:CC_0874 conserved hypothetical protein.
 
 
 0.751
Caul_0844
KEGG: xcv:XCVc0016 hypothetical protein.
  
 
 0.577
Caul_2257
KEGG: rpa:RPA2234 hypothetical protein.
  
 
 0.577
Caul_3826
KEGG: xau:Xaut_0750 hypothetical protein.
 
 
 0.576
Caul_0774
Putative addiction module antidote protein, CopG/Arc/MetJ family; PFAM: protein of unknown function UPF0156; KEGG: rle:pRL120721 hypothetical protein.
  
 
 0.571
Caul_0985
PFAM: plasmid stabilization system; KEGG: ccr:CC_0873 hypothetical protein; Belongs to the RelE toxin family.
  
     0.570
Caul_4906
TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: rru:Rru_A2377 predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain.
  
 
 0.515
Caul_2026
PFAM: CopG domain protein DNA-binding domain protein; KEGG: pla:Plav_1834 CopG domain protein DNA-binding domain protein.
  
 
 0.512
Caul_3631
TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: aba:Acid345_2090 RelB antitoxin.
 
 
   0.494
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.