STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1574PFAM: VacJ family lipoprotein; KEGG: ccr:CC_3692 lipoprotein. (317 aa)    
Predicted Functional Partners:
Caul_1575
PFAM: toluene tolerance family protein; KEGG: ccr:CC_3693 hypothetical protein.
 
 
 
 0.957
Caul_1576
PFAM: Mammalian cell entry related domain protein; KEGG: ccr:CC_3694 putative ABC transport system substrate-bindin protein.
 
   
 0.918
Caul_1331
PFAM: toluene tolerance family protein; KEGG: ccr:CC_3693 hypothetical protein.
 
 
 
 0.826
Caul_1577
PFAM: protein of unknown function DUF140; KEGG: ccr:CC_3695 putative ABC transport system permease protein.
 
   
 0.808
Caul_1330
PFAM: Mammalian cell entry related domain protein; KEGG: ccr:CC_3694 putative ABC transport system substrate-bindin protein.
 
   
 0.803
Caul_1578
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccr:CC_3696 putative ABC transport system ATP-binding protein.
 
   
 0.796
Caul_1386
KEGG: rpc:RPC_0107 hypothetical protein.
   
 
 0.670
Caul_1579
Hypothetical protein.
       0.537
Caul_1329
PFAM: protein of unknown function DUF140; KEGG: ccr:CC_3695 putative ABC transport system permease protein.
 
   
 0.526
Caul_1328
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccr:CC_3696 putative ABC transport system ATP-binding protein.
 
   
 0.477
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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