STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1663KEGG: ccr:CC_2910 hypothetical protein. (291 aa)    
Predicted Functional Partners:
Caul_5058
Glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ccr:CC_3722 2-hydroxyacid dehydrogenase.
    
 0.910
Caul_4467
TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ccr:CC_3215 D-3-phosphoglycerate dehydrogenase.
     
 0.906
Caul_0443
PFAM: Aldehyde dehydrogenase; KEGG: ppu:PP_1948 benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.900
gpmA
Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
     
  0.900
Caul_2375
PFAM: Aldehyde dehydrogenase; KEGG: swi:Swit_1723 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.900
Caul_4341
PFAM: Aldehyde dehydrogenase; KEGG: ccr:CC_0419 aldehyde dehydrogenase.
     
  0.900
Caul_1662
PFAM: 2-deoxycytidine 5-triphosphate deaminase; KEGG: ccr:CC_2237 putative deoxycytidine triphosphate deaminase protein.
       0.570
Caul_1664
KEGG: ccr:CC_2236 hypothetical protein.
       0.491
Caul_1862
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcv:XCV4224 TonB-dependent outer membrane receptor.
  
     0.451
Caul_1233
KEGG: ccr:CC_0773 hypothetical protein.
  
     0.441
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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