STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1825Hypothetical protein. (195 aa)    
Predicted Functional Partners:
Caul_1824
PFAM: tail sheath protein; KEGG: bra:BRADO4390 putative phage tail sheath protein.
       0.525
Caul_1823
TIGRFAM: conserved hypothetical phage tail protein; PFAM: conserved hypothetical protein; KEGG: aba:Acid345_0862 hypothetical protein.
       0.518
Caul_1826
Hypothetical protein.
       0.515
Caul_1815
KEGG: bra:BRADO4381 hypothetical protein.
       0.502
Caul_1816
KEGG: aba:Acid345_0855 hypothetical protein.
       0.502
Caul_1817
KEGG: bra:BRADO4383 conserved hypothetical protein; putative signal peptide.
       0.502
Caul_1818
Hypothetical protein.
       0.502
Caul_1819
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_1651 AAA ATPase, central domain protein.
       0.502
Caul_1820
KEGG: bra:BRADO4386 conserved hypothetical protein; putative secreted protein.
       0.502
Caul_1821
Hypothetical protein; KEGG: gga:396544 nascent polypeptide-associated complex alpha subunit.
       0.502
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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