STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1882PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_C0607 transcriptional regulator, IclR family. (274 aa)    
Predicted Functional Partners:
Caul_4449
TIGRFAM: urea amidolyase related protein; urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: ccr:CC_1829 UreA amidolyase-related protein.
  
    0.971
Caul_1542
PFAM: regulatory protein IclR; KEGG: bxe:Bxe_B2965 transcriptional regulator, IclR family.
  
     0.663
Caul_0578
PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pde:Pden_3050 regulatory proteins, IclR.
  
     0.616
Caul_1881
PFAM: thioesterase superfamily protein; KEGG: mkm:Mkms_4926 thioesterase superfamily protein.
  
    0.517
Caul_1548
PFAM: regulatory protein IclR; KEGG: xcv:XCV4290 transcriptional regulator, IclR family.
  
     0.470
Caul_1975
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: bxe:Bxe_C0587 Rieske-type ring hydroxylating dioxygenase beta subunit.
 
   
 0.428
Caul_1903
PFAM: protein of unknown function DUF35; KEGG: bxe:Bxe_C0582 hypothetical protein.
 
     0.421
Caul_3710
PFAM: regulatory protein TetR; KEGG: ccr:CC_2608 transcriptional regulator, TetR family.
  
   
 0.419
Caul_1902
KEGG: bxe:Bxe_C0581 hypothetical protein.
 
  
 0.418
Caul_1916
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: bxe:Bxe_C0587 Rieske-type ring hydroxylating dioxygenase beta subunit.
 
   
 0.417
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.