STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1895PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_C0605 putative acyl-CoA dehydrogenase. (383 aa)    
Predicted Functional Partners:
Caul_1894
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_C0604 putative acyl-CoA dehydrogenase.
     0.953
Caul_1893
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_3272 enoyl-CoA hydratase/isomerase.
 
 0.887
Caul_0125
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ccr:CC_0076 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase.
  
 0.853
Caul_1892
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_C0602 putative acyl-CoA dehydrogenase.
 
    
0.836
Caul_1891
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_C0589 putative short-chain dehydrogenase/reductase.
  
  0.778
Caul_3427
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccr:CC_2479 acyl-CoA dehydrogenase family protein.
 
    
0.770
Caul_0813
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ccr:CC_3189 fatty oxidation complex, alpha subunit; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.756
Caul_1046
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: ccr:CC_0726 electron transfer flavoprotein, alpha subunit.
 
 
 0.734
Caul_1047
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ccr:CC_0727 electron transfer flavoprotein, beta subunit.
 
 
 0.687
Caul_1896
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bxe:Bxe_C0596 3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.675
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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