Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
Caul_1900PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_C0598 putative carboxymuconolactone decarboxylase. (173 aa)    
Predicted Functional Partners:
Caul_1901
KEGG: bxe:Bxe_C0644 hypothetical protein.
 
   
 0.924
Caul_1903
PFAM: protein of unknown function DUF35; KEGG: bxe:Bxe_C0582 hypothetical protein.
 
     0.828
Caul_1899
PFAM: protein of unknown function DUF6 transmembrane; KEGG: ccr:CC_0093 integral membrane protein.
       0.775
Caul_1902
KEGG: bxe:Bxe_C0581 hypothetical protein.
 
     0.764
Caul_1884
PFAM: amidohydrolase 2; KEGG: bxe:Bxe_C0606 hypothetical protein.
  
     0.579
Caul_1976
PFAM: amidohydrolase 2; KEGG: bxe:Bxe_C0606 hypothetical protein.
  
     0.573
cysC
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
    0.554
Caul_1904
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_C0643 putative enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.535
Caul_1921
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_C0640 aromatic ring-cleavage dioxygenase.
  
     0.529
Caul_1975
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: bxe:Bxe_C0587 Rieske-type ring hydroxylating dioxygenase beta subunit.
  
     0.528
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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