STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1908PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_5045 TonB-dependent receptor. (755 aa)    
Predicted Functional Partners:
Caul_3783
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_2291 TonB-dependent receptor.
  
    0.771
Caul_3289
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_1691 TonB-dependent receptor.
  
    0.759
Caul_1970
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_4318 TonB-dependent receptor.
  
   
 0.743
Caul_4007
PFAM: TonB-dependent receptor; KEGG: swi:Swit_0680 TonB-dependent receptor.
  
     0.734
Caul_0591
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcb:XC_2899 TonB-dependent receptor.
  
    0.720
Caul_3922
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xft:PD1711 TonB-dependent receptor.
  
    0.711
Caul_4694
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_0214 TonB-dependent receptor.
  
   
 0.670
Caul_2243
PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: ccr:CC_2709 TonB-dependent receptor.
  
    0.633
Caul_2548
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xfa:XF0339 hypothetical protein.
  
    0.631
Caul_1988
PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: ccr:CC_2709 TonB-dependent receptor.
  
    0.609
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.