STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1980KEGG: bbt:BBta_7428 hypothetical protein. (90 aa)    
Predicted Functional Partners:
Caul_3815
KEGG: mes:Meso_3838 hypothetical protein.
 
     0.782
Caul_3820
KEGG: pla:Plav_3534 hypothetical protein.
 
     0.776
Caul_2249
KEGG: bbt:BBta_3348 hypothetical protein.
 
     0.775
Caul_3822
PFAM: protein of unknown function DUF736; KEGG: xau:Xaut_2872 protein of unknown function DUF736.
 
     0.774
Caul_3816
KEGG: rpe:RPE_4033 putative transcriptional regulator.
 
     0.771
Caul_3821
KEGG: xau:Xaut_0756 putative conjugal transfer protein precursor.
 
     0.769
Caul_3809
KEGG: xau:Xaut_2861 hypothetical protein.
  
     0.765
Caul_2248
KEGG: nar:Saro_0365 hypothetical protein.
 
     0.764
Caul_3824
KEGG: xau:Xaut_0752 hypothetical protein.
  
     0.763
Caul_3826
KEGG: xau:Xaut_0750 hypothetical protein.
 
     0.757
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.