Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Caul_1986PFAM: asparagine synthase; KEGG: ccr:CC_2711 hypothetical protein. (583 aa)    
Predicted Functional Partners:
Caul_1985
KEGG: ccr:CC_2712 hypothetical protein.
       0.787
Caul_1751
KEGG: ccr:CC_1485 hypothetical protein.
  
  
 0.781
Caul_1491
KEGG: ccr:CC_1545 hypothetical protein.
  
     0.759
Caul_1988
PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: ccr:CC_2709 TonB-dependent receptor.
  
    0.759
Caul_3465
KEGG: ccr:CC_2504 hypothetical protein.
  
     0.756
Caul_4552
PFAM: Autotransporter beta- domain protein; KEGG: ccr:CC_0288 hypothetical protein.
  
     0.754
Caul_0062
PFAM: aldo/keto reductase; KEGG: ccr:CC_3576 hypothetical protein.
  
     0.749
Caul_5071
KEGG: ccr:CC_3711 hypothetical protein.
  
     0.749
Caul_3423
PFAM: Sel1 domain protein repeat-containing protein; KEGG: ccr:CC_2477 hypothetical protein.
  
     0.748
Caul_4687
PFAM: TonB-dependent receptor; KEGG: ccr:CC_0224 hypothetical protein.
  
     0.746
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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