Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caul_2004PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: maq:Maqu_1909 methyltransferase type 11. (236 aa)    
Predicted Functional Partners:
Caul_2002
PFAM: Integrase catalytic region; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein.
       0.773
Caul_2003
PFAM: transposase IS3/IS911 family protein; KEGG: azc:AZC_3852 transposase.
       0.773
coq7
Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 0.705
Caul_0901
TIGRFAM: rpsU-divergently transcribed protein; PFAM: COQ9 domain protein; KEGG: ccr:CC_3296 hypothetical protein.
   
 0.683
Caul_1464
KEGG: rme:Rmet_1010 putative uncharacterized protein involved in ubiquinone biosynthesis.
    
 0.661
Caul_3278
Tryptophan halogenase; PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: mmr:Mmar10_2723 tryptophan halogenase.
 
 
 0.599
Caul_4092
PFAM: tryptophan halogenase; KEGG: ccr:CC_2288 tryptophan halogenase, putative.
 
 
 0.597
Caul_1842
Tryptophan halogenase; PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: ccr:CC_2805 tryptophan halogenase, putative.
 
 
 0.594
Caul_1290
Tryptophan halogenase; PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: ccr:CC_0787 tryptophan halogenase, putative.
 
 
 0.593
Caul_1853
PFAM: tryptophan halogenase; KEGG: ccr:CC_1002 tryptophan halogenase, putative.
 
 
 0.592
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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