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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_2018PFAM: PilT protein domain protein; KEGG: ret:RHE_PB00085 putative plasmid stabilization protein. (145 aa)    
Predicted Functional Partners:
Caul_2019
PFAM: protein of unknown function DUF433; KEGG: ret:RHE_PA00164 hypothetical protein.
     
 0.791
Caul_3557
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
   
 0.748
Caul_0233
PFAM: SpoVT/AbrB domain protein; KEGG: bbt:BBta_4599 putative nitrogen regulatory protein.
 
 
 0.711
Caul_4123
KEGG: ccr:CC_0032 VapB family protein.
  
 
 0.566
Caul_0844
KEGG: xcv:XCVc0016 hypothetical protein.
 
 
   0.543
vapC
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.502
Caul_0653
Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: eba:ebA2689 DNA-binding protein.
 
     0.494
Caul_4019
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.488
Caul_0652
KEGG: pla:Plav_1954 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system.
 
   
 0.469
vapC-7
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.449
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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