STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_2077PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swi:Swit_3493 ABC transporter related. (220 aa)    
Predicted Functional Partners:
Caul_2083
PFAM: ABC-2 type transporter; KEGG: zmo:ZMO1467 ABC-2 transporter.
 0.997
Caul_2082
KEGG: swi:Swit_4014 capsule polysaccharide export-like protein.
 
 
 0.987
Caul_2085
PFAM: Capsule polysaccharide biosynthesis protein; KEGG: swi:Swit_2453 capsule polysaccharide biosynthesis protein.
 
  
 0.921
Caul_2079
PFAM: polysaccharide export protein; KEGG: swi:Swit_3494 polysaccharide export protein.
 
  
 0.920
Caul_4931
ABC-2 type transporter protein; KEGG: nha:Nham_2778 ABC-2.
  
 
 0.869
Caul_2078
PFAM: glycosyl transferase group 1; KEGG: swi:Swit_3491 glycosyl transferase, group 1.
 
 
 0.808
Caul_2118
PFAM: Capsule polysaccharide biosynthesis protein; KEGG: swi:Swit_2454 capsule polysaccharide biosynthesis protein.
 
   
 0.807
Caul_2084
PFAM: glycosyl transferase group 1; KEGG: swi:Swit_4016 glycosyl transferase, group 1.
 
 
 0.762
Caul_2119
PFAM: glycosyl transferase group 1; KEGG: swi:Swit_4016 glycosyl transferase, group 1.
 
 
 0.753
Caul_2081
PFAM: glycosyl transferase group 1; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: swi:Swit_4017 glycosyl transferase, group 1.
 
 
 0.671
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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