Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caul_2136KEGG: aba:Acid345_1053 sugar transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (447 aa)    
Predicted Functional Partners:
Caul_0381
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sal:Sala_1510 major facilitator superfamily MFS_1.
  
     0.618
Caul_2135
PFAM: ROK family protein; KEGG: rle:pRL120354 putative ROK family transcriptional regulator.
     
 0.601
Caul_4087
PFAM: major facilitator superfamily MFS_1; KEGG: ccr:CC_2283 transporter, putative.
 
     0.472
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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