Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Caul_2156 | Caul_2157 | Caul_2156 | Caul_2157 | KEGG: ccr:CC_1325 hypothetical protein. | PFAM: (Uracil-5)-methyltransferase; KEGG: ccr:CC_1326 RNA methyltransferase, TrmA family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.478 |
Caul_2156 | Caul_2158 | Caul_2156 | Caul_2158 | KEGG: ccr:CC_1325 hypothetical protein. | Methyltransferase type 11; PFAM: putative methyltransferase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ccr:CC_1327 ubiquinone/menaquinone biosynthesis methlytransferase family protein. | 0.408 |
Caul_2156 | engB | Caul_2156 | Caul_0639 | KEGG: ccr:CC_1325 hypothetical protein. | GTP-binding protein HSR1-related; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.631 |
Caul_2157 | Caul_2156 | Caul_2157 | Caul_2156 | PFAM: (Uracil-5)-methyltransferase; KEGG: ccr:CC_1326 RNA methyltransferase, TrmA family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | KEGG: ccr:CC_1325 hypothetical protein. | 0.478 |
Caul_2157 | Caul_2158 | Caul_2157 | Caul_2158 | PFAM: (Uracil-5)-methyltransferase; KEGG: ccr:CC_1326 RNA methyltransferase, TrmA family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Methyltransferase type 11; PFAM: putative methyltransferase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ccr:CC_1327 ubiquinone/menaquinone biosynthesis methlytransferase family protein. | 0.699 |
Caul_2158 | Caul_2156 | Caul_2158 | Caul_2156 | Methyltransferase type 11; PFAM: putative methyltransferase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ccr:CC_1327 ubiquinone/menaquinone biosynthesis methlytransferase family protein. | KEGG: ccr:CC_1325 hypothetical protein. | 0.408 |
Caul_2158 | Caul_2157 | Caul_2158 | Caul_2157 | Methyltransferase type 11; PFAM: putative methyltransferase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ccr:CC_1327 ubiquinone/menaquinone biosynthesis methlytransferase family protein. | PFAM: (Uracil-5)-methyltransferase; KEGG: ccr:CC_1326 RNA methyltransferase, TrmA family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.699 |
engB | Caul_2156 | Caul_0639 | Caul_2156 | GTP-binding protein HSR1-related; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | KEGG: ccr:CC_1325 hypothetical protein. | 0.631 |