STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_2162TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mlo:mlr4094 hypothetical protein, putative hydrolase. (216 aa)    
Predicted Functional Partners:
Caul_2163
KEGG: ccr:CC_1331 hypothetical protein.
     
 0.573
Caul_1313
KEGG: ccr:CC_0920 hypothetical protein.
  
    0.536
Caul_2984
KEGG: rpa:RPA4242 hypothetical protein.
  
    0.536
Caul_0303
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: aba:Acid345_2519 alpha amylase.
  
 0.508
Caul_4089
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ccr:CC_2285 alpha-glucosidase.
  
 0.505
Caul_1748
PFAM: major facilitator superfamily MFS_1; KEGG: ccr:CC_1481 membrane protein, putative.
  
  
 0.455
Caul_4612
PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: ccr:CC_1628 hypothetical protein.
  
  
 0.455
Caul_0295
TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: ccr:CC_0449 PTS system, N-acetylglucosamine-specific IIABC component.
  
  
 0.439
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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