STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_2205PFAM: GCN5-related N-acetyltransferase; KEGG: ccr:CC_1609 acetyltransferase, GNAT family. (170 aa)    
Predicted Functional Partners:
Caul_2201
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ccr:CC_1605 hypothetical protein.
       0.785
Caul_2202
KEGG: ccr:CC_1606 arginine N-succinyltransferase; TIGRFAM: arginine/ornithine succinyltransferase subunit; PFAM: arginine N-succinyltransferase beta subunit.
       0.784
astD
Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
       0.776
astB
Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).
       0.775
Caul_2200
PFAM: protein of unknown function DUF490; KEGG: ccr:CC_1604 hypothetical protein.
       0.447
Caul_2199
PFAM: surface antigen (D15); KEGG: ccr:CC_1603 putative outer membrane protein.
       0.446
Caul_1534
KEGG: ccr:CC_1079 hypothetical protein.
  
     0.441
Caul_3423
PFAM: Sel1 domain protein repeat-containing protein; KEGG: ccr:CC_2477 hypothetical protein.
 
    0.404
Caul_4690
PFAM: protein of unknown function DUF1353; KEGG: ccr:CC_0218 hypothetical protein.
  
     0.404
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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