STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_2425PFAM: protein of unknown function DUF125 transmembrane; KEGG: mlo:mlr6622 similar to nodulin 21. (231 aa)    
Predicted Functional Partners:
Caul_2421
KEGG: xau:Xaut_4948 hypothetical protein.
       0.789
Caul_2424
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: xau:Xaut_4951 integral membrane sensor signal transduction histidine kinase.
       0.789
Caul_2422
PFAM: cytochrome B561; KEGG: xau:Xaut_4949 cytochrome b561.
       0.787
Caul_2423
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bvi:Bcep1808_5976 two component transcriptional regulator, winged helix family.
       0.773
Caul_2420
PFAM: Rubrerythrin; KEGG: xau:Xaut_4947 rubrerythrin.
       0.511
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.