STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_2447PFAM: Patatin; KEGG: ccr:CC_3488 hypothetical protein. (375 aa)    
Predicted Functional Partners:
Caul_5071
KEGG: ccr:CC_3711 hypothetical protein.
  
     0.605
Caul_3338
PFAM: protein of unknown function DUF214; KEGG: ccr:CC_2090 hypothetical protein.
  
     0.514
Caul_1344
KEGG: ccr:CC_0937 hypothetical protein.
  
     0.500
Caul_2448
Hypothetical protein.
       0.460
Caul_2449
TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: azo:azo0111 putative alcohol dehydrogenase.
       0.460
Caul_2446
KEGG: mlo:mll6588 hypothetical protein.
       0.456
Caul_4508
KEGG: ccr:CC_3409 hypothetical protein.
  
     0.441
Caul_1751
KEGG: ccr:CC_1485 hypothetical protein.
 
     0.423
Caul_0062
PFAM: aldo/keto reductase; KEGG: ccr:CC_3576 hypothetical protein.
  
     0.415
Caul_3261
KEGG: ccr:CC_1125 hypothetical protein.
  
     0.408
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.