STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_2680TIGRFAM: FAD-linked oxidoreductase; PFAM: FAD linked oxidase domain protein; D-arabinono-14-lactone oxidase; KEGG: sal:Sala_3174 FAD-linked oxidoreductase. (424 aa)    
Predicted Functional Partners:
Caul_2681
PFAM: alanine racemase domain protein; KEGG: sal:Sala_3175 threonine aldolase family protein.
  
    0.772
Caul_2679
PFAM: regulatory protein TetR; KEGG: hne:HNE_2424 transcriptional regulator, TetR family.
 
     0.686
lldD
FMN-dependent alpha-hydroxy acid dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.
  
 0.543
Caul_4950
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ccr:CC_3607 glutamate synthase, large subunit.
     
 0.518
Caul_1046
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: ccr:CC_0726 electron transfer flavoprotein, alpha subunit.
  
 
 0.514
Caul_1047
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ccr:CC_0727 electron transfer flavoprotein, beta subunit.
  
 
 0.514
Caul_2678
KEGG: mlo:mlr8206 probable MFS transporter.
       0.512
Caul_2677
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hne:HNE_2423 TonB-dependent receptor.
  
    0.489
Caul_2941
PFAM: fatty acid desaturase; KEGG: rca:Rcas_1533 fatty acid desaturase.
  
     0.480
Caul_4407
PFAM: aminoglycoside phosphotransferase; KEGG: ccr:CC_1233 hypothetical protein.
  
 
   0.424
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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