STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_2984KEGG: rpa:RPA4242 hypothetical protein. (345 aa)    
Predicted Functional Partners:
Caul_1771
HAD-superfamily hydrolase, subfamily IIB; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.962
Caul_2983
PFAM: UspA domain protein; KEGG: ccr:CC_1452 hypothetical protein.
  
    0.778
Caul_2380
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: nmu:Nmul_A0037 ATPase, E1-E2 type.
 
  
 0.704
Caul_2973
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: azc:AZC_2983 cation-transporting ATPase.
 
  
 0.647
Caul_4209
KEGG: azc:AZC_1824 ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein.
 
  
 0.639
Caul_2982
PFAM: UspA domain protein; KEGG: bxe:Bxe_A1854 hypothetical protein.
 
    0.609
Caul_0622
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; Two component regulator propeller; Two component regulator three Y domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: xcv:XCV2155 two-component system sensor protein.
  
  
 0.543
Caul_0320
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN3015 hydrolase, haloacid dehalogenase-like family.
  
    0.536
Caul_2162
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mlo:mlr4094 hypothetical protein, putative hydrolase.
  
    0.536
phnX
Phosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.
  
    0.536
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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