STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_3174KEGG: cph:Cpha266_1474 hypothetical protein. (359 aa)    
Predicted Functional Partners:
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.
       0.556
Caul_3173
PFAM: protein of unknown function DUF1428; KEGG: mlo:mlr2642 hypothetical protein.
       0.536
Caul_1117
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hne:HNE_0298 glyoxalase family protein.
 
    0.506
Caul_1950
PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: sat:SYN_02065 export ABC transporter ATP-binding protein / export ABC transporter permease protein.
  
  
 0.470
Caul_4950
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ccr:CC_3607 glutamate synthase, large subunit.
     
 0.463
Caul_0160
KEGG: ccr:CC_0158 hypothetical protein.
 
    0.457
Caul_3429
PFAM: Abortive infection protein; KEGG: xcb:XC_0600 putative transmembrane protein.
 
  
 0.445
Caul_4749
PFAM: Abortive infection protein; KEGG: ccr:CC_3458 hypothetical protein.
 
  
 0.442
Caul_1229
PFAM: ABC-2 type transporter; KEGG: ccr:CC_2244 ABC-2 type transporter.
  
  
 0.403
Caul_1709
PFAM: ABC-2 type transporter; KEGG: xau:Xaut_4131 ABC-2 type transporter.
  
  
 0.403
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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