Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Caul_3206TAP domain protein; PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: ccr:CC_0352 hypothetical protein. (475 aa)    
Predicted Functional Partners:
Caul_0582
PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain protein; KEGG: xau:Xaut_1571 dehydrogenase E1 component.
   
 0.586
Caul_0587
PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain protein; KEGG: pde:Pden_3049 transketolase, central region.
   
 0.586
Caul_3205
PFAM: glutamyl-tRNA synthetase class Ic; KEGG: ccr:CC_2205 glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.539
Caul_2364
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rpb:RPB_1143 sarcosine oxidase, alpha subunit family; Belongs to the GcvT family.
  
 0.488
Caul_0366
PFAM: NAD-dependent epimerase/dehydratase; KEGG: ccr:CC_3425 hypothetical protein.
  
  
  0.473
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.