STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_3207PFAM: beta-lactamase; KEGG: aba:Acid345_0612 beta-lactamase. (357 aa)    
Predicted Functional Partners:
Caul_1745
PFAM: beta-lactamase; KEGG: ccr:CC_1567 hypothetical protein.
  
     0.749
Caul_3362
PFAM: beta-lactamase; KEGG: ccr:CC_2105 hypothetical protein.
  
     0.740
Caul_0812
PFAM: beta-lactamase; KEGG: ccr:CC_3190 hypothetical protein.
  
     0.738
Caul_4667
PFAM: beta-lactamase; KEGG: ccr:CC_0575 beta-lactamase, putative.
  
     0.558
Caul_2993
KEGG: hch:HCH_03436 hypothetical protein.
  
     0.464
Caul_0571
PFAM: beta-lactamase; KEGG: hne:HNE_1031 putative esterase.
  
     0.461
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.