STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_3328PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: ccr:CC_2082 leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (353 aa)    
Predicted Functional Partners:
Caul_4950
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ccr:CC_3607 glutamate synthase, large subunit.
  
 
 0.990
Caul_0582
PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain protein; KEGG: xau:Xaut_1571 dehydrogenase E1 component.
  
 
 0.987
Caul_0587
PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain protein; KEGG: pde:Pden_3049 transketolase, central region.
  
 
 0.987
Caul_1870
PFAM: dehydrogenase E1 component; KEGG: swi:Swit_0782 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring).
  
 
 0.947
Caul_1871
PFAM: Transketolase central region; Transketolase domain protein; KEGG: swi:Swit_0781 transketolase, central region.
  
 
 0.946
Caul_4200
PFAM: aminotransferase class IV; KEGG: ccr:CC_2952 4-amino-4-deoxychorismate lyase.
 
 
 0.938
Caul_4084
KEGG: swi:Swit_0778 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV.
  
 
 0.926
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
 
 0.917
ilvD
KEGG: pla:Plav_3010 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
   
 0.916
Caul_3613
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: ccr:CC_1421 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
   
 0.916
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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