STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_3359PFAM: protein of unknown function DUF1321; KEGG: ccr:CC_2102 hypothetical protein. (161 aa)    
Predicted Functional Partners:
Caul_0876
KEGG: ccr:CC_3319 hypothetical protein; Belongs to the UPF0335 family.
  
   
 0.868
Caul_0912
PFAM: protein of unknown function DUF1013; KEGG: ccr:CC_3292 hypothetical protein.
  
   
 0.862
Caul_3037
PFAM: SmpA/OmlA domain protein; KEGG: ccr:CC_1365 hypothetical protein.
  
   
 0.847
Caul_3360
PFAM: thioesterase superfamily protein; KEGG: ccr:CC_2103 hypothetical protein.
       0.773
Caul_4852
TIGRFAM: double-strand break repair protein AddB; KEGG: ccr:CC_3537 hypothetical protein.
  
     0.757
Caul_4853
TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: ccr:CC_3538 helicase, UvrD/Rep family; Belongs to the helicase family. UvrD subfamily.
  
     0.740
Caul_5038
PFAM: import inner membrane translocase subunit Tim44; KEGG: ccr:CC_3741 hypothetical protein.
  
     0.740
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.734
Caul_2561
PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: ccr:CC_1887 NADH-ubiquinone oxidoreductase.
 
   
 0.729
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.723
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.