STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_3532PFAM: alpha/beta hydrolase fold; KEGG: pla:Plav_1674 alpha/beta hydrolase fold. (298 aa)    
Predicted Functional Partners:
Caul_3533
PFAM: protein of unknown function DUF1080; KEGG: ccr:CC_1082 hypothetical protein.
       0.528
Caul_3682
PFAM: FAD dependent oxidoreductase; KEGG: ccr:CC_2569 monooxygenase, flavin-binding family.
 
 0.482
Caul_3530
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: xau:Xaut_4033 ethanolamine ammonia-lyase; Belongs to the EutC family.
       0.412
Caul_3531
PFAM: Ethanolamine ammonia lyase large subunit; KEGG: azc:AZC_3564 ethanolamine ammonia-lyase large subunit.
       0.412
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.